Thomas A. Lasko, M.D., Ph.D.

Assistant Professor
Faculty Appointments
Assistant Professor of Biomedical Informatics
Ph.D., Electrical Engineering & Computer Science, Massachusetts Institute of Technology, Cambridge, MassachusettsM.D., University of California, San Diego, CaliforniaB.S., University of California, San Diego, California
Lasko TA, Walsh CG, Malin B. Benefits and Risks of Machine Learning Decision Support Systems [letter]. JAMA. 2017 Dec 12/19/2017; 318(23): 2355. PMID: 29260218, PII: 2666495, DOI: 10.1001/jama.2017.16623, ISSN: 1538-3598.

Davis SE, Lasko TA, Chen G, Siew ED, Matheny ME. Calibration drift in regression and machine learning models for acute kidney injury. J Am Med Inform Assoc. 2017 Nov 11/1/2017; 24(6): 1052-61. PMID: 28379439, PII: 3096776, DOI: 10.1093/jamia/ocx030, ISSN: 1527-974X.

Teixeira PL, Wei WQ, Cronin RM, Mo H, VanHouten JP, Carroll RJ, LaRose E, Bastarache LA, Rosenbloom ST, Edwards TL, Roden DM, Lasko TA, Dart RA, Nikolai AM, Peissig PL, Denny JC. Evaluating electronic health record data sources and algorithmic approaches to identify hypertensive individuals. J Am Med Inform Assoc [print-electronic]. 2017 Jan; 24(1): 162-71. PMID: 27497800, PMCID: PMC5201185, PII: ocw071, DOI: 10.1093/jamia/ocw071, ISSN: 1527-974X.

Chaganti S, Robinson JR, Bermudez C, Lasko T, Mawn LA, Landman BA. EMR-Radiological Phenotypes in Diseases of the Optic Nerve and their Association with Visual Function. Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2017) [print-electronic]. 2017; 2017: 373-81. PMID: 29392245, PMCID: PMC5790176, DOI: 10.1007/978-3-319-67558-9_43.

Chen Y, Lasko TA, Mei Q, Denny JC, Xu H. A study of active learning methods for named entity recognition in clinical text. J Biomed Inform [print-electronic]. 2015 Dec; 58: 11-8. PMID: 26385377, PMCID: PMC4934373, PII: S1532-0464(15)00203-8, DOI: 10.1016/j.jbi.2015.09.010, ISSN: 1532-0480.

Lasko TA. Nonstationary Gaussian Process Regression for Evaluating Clinical Laboratory Test Sampling Strategies. Proc Conf AAAI Artif Intell. 2015 Jan; 2015: 1777-83. PMID: 26097785, PMCID: PMC4472307, ISSN: 2159-5399.

Lasko TA. Efficient Inference of Gaussian-Process-Modulated Renewal Processes with Application to Medical Event Data. Uncertain Artif Intell. 2014 Jul; 2014: 469-76. PMID: 25552936, PMCID: PMC4278374, ISSN: 1525-3384.

VanHouten JP, Starmer JM, Lorenzi NM, Maron DJ, Lasko TA. Machine learning for risk prediction of acute coronary syndrome. AMIA Annu Symp Proc. 2014; 2014: 1940-9. PMID: 25954467, PMCID: PMC4419888, ISSN: 1942-597X.

Wei WQ, Cronin RM, Xu H, Lasko TA, Bastarache L, Denny JC. Development and evaluation of an ensemble resource linking medications to their indications. J Am Med Inform Assoc [print-electronic]. 2013 Sep; 20(5): 954-61. PMID: 23576672, PMCID: PMC3756263, PII: amiajnl-2012-001431, DOI: 10.1136/amiajnl-2012-001431, ISSN: 1527-974X.

Wei WQ, Cronin RM, Xu H, Lasko TA, Bastarache L, Denny JC. Development of an ensemble resource linking MEDications to their Indications (MEDI). AMIA Jt Summits Transl Sci Proc. 2013; 2013: 172. PMID: 24303333, ISSN: 2153-4063.

Lasko TA, Denny JC, Levy MA. Scalable Data-driven Phenotypes via Unsupervised Feature Learning. AMIA Jt Summits Transl Sci Proc. 2013; 2013: 106. PMID: 24303314, ISSN: 2153-4063.

Lasko TA, Denny JC, Levy MA. Computational phenotype discovery using unsupervised feature learning over noisy, sparse, and irregular clinical data. PLoS ONE [electronic-print]. 2013; 8(6): e66341. PMID: 23826094, PMCID: PMC3691199, PII: PONE-D-12-40629, DOI: 10.1371/journal.pone.0066341, ISSN: 1932-6203.

Carroll RJ, Thompson WK, Eyler AE, Mandelin AM, Cai T, Zink RM, Pacheco JA, Boomershine CS, Lasko TA, Xu H, Karlson EW, Perez RG, Gainer VS, Murphy SN, Ruderman EM, Pope RM, Plenge RM, Kho AN, Liao KP, Denny JC. Portability of an algorithm to identify rheumatoid arthritis in electronic health records. J Am Med Inform Assoc [print-electronic]. 2012 Jun; 19(e1): e162-9. PMID: 22374935, PMCID: PMC3392871, PII: amiajnl-2011-000583, DOI: 10.1136/amiajnl-2011-000583, ISSN: 1527-974X.